Gentlemen, it runs!!!!
Today I hooked up all the remaining wires in the ingestion system and was able to get the car running on starting fluid. I then swapped in a new mechanical fuel pump and I was able to run the car on gas from the tank! That being said very little in the way of sensors or lights have been hooked up but that's the next major step. There are some problems with the S2 harness compared to an S1 I'm discovering. Most vexing currently is the fact that the fuel level sender is on the left-hand side of the car but my car has the tank on the right-hand side. Its a minor inconvenience I know but I'll still whine about it. I'm also currently running the car off an Odyssey battery that's being held to the right rear frame rail with massive hose clamps. I guess it ain't stupid if it works! I'll either make or purchase a battery tray or bracket as soon as I'm able to. The brake MC and the wheel cylinders are currently in the mail so I may be driving the car for short test runs around the neighborhood in relatively short order.
Other than the brakes I have one small, and one large problem to tackle. The small one is related to the alternator. Someone at some point seems to have swapped an alternator into the car. It seems to be a Mitsubishi with a strange green plug at the back (the first pic) and it has a red wire and a black wire coming off of it. The car seems to have been wired with the brown wire with green stripe being butt-connected to the IG terminal on the alternator to run to the voltage regulator, but the alternator has a sticker that reads IC reg built in. I'm beginning to get confused by that, as well as the fact that my S1 didn't have a relay in the charging system that an S2 appears to have according to the diagrams. It seems my alternator has only the plug and the stud for the ring terminal so I have no idea where to attach the ground either. I probably won't have much time until next weekend to figure it anything else out, but that's where I currently am on the charging system.
The large problem is I seem to have a pretty substantial coolant leak from the water pump. I'll attach pics but it seems that the leak is occurring from the bolts or the mating surface on the bottom edge closest to the swirl pot. The position of the heater valve doesn't seem to have any bearing on the leak, and it seems to start after the engine has been run for a little while, but not immediately on firing up. I'm inclined to believe it's the water pump gasket. What do y'all think? Is there any other common failure that may cause a leak from there?